MEGA to SharePoint: 3 Practical Ways to Transfer Your Files

Moving files from MEGA to Microsoft SharePoint is often more complicated than it looks at first. Factors such as encrypted file handling, large directory structures, and limited local disk space can quickly slow things down. This guide walks through three realistic ways to complete the transfer: using a browser to download and upload files manually, relying on rclone for command-line based transfers, and using CloudsLinker to move data directly from MEGA to SharePoint in the cloud.

Introduction

Although both MEGA and Microsoft SharePoint provide cloud storage, they are designed with very different goals in mind. MEGA focuses heavily on privacy and end-to-end encryption, which makes it a popular option for personal storage and small teams that value security and simple sharing. SharePoint, on the other hand, acts as a centralized document platform within Microsoft 365, supporting structured collaboration through Teams, OneDrive, and Office applications. When users decide to move files from MEGA into SharePoint—whether for better collaboration, policy requirements, or long-term document management—they quickly discover that there is no native integration between the two services. As a result, file transfers usually rely on external methods. In practice, there are three commonly used approaches: manually downloading files from MEGA and uploading them to SharePoint through a web interface, using command-line tools such as rclone to automate the transfer, or choosing a cloud-based service like CloudsLinker that connects both platforms and transfers data directly between them without involving local storage.

Method 1: Download from MEGA and Upload Manually
Method 2: Transfer Files Using Rclone
Method 3: Transfer Online with CloudsLinker
Comparison of MEGA and SharePoint
Things to Consider Before Transferring
FAQ

What is MEGA?

MEGA is a cloud storage service best known for its strong end-to-end encryption and privacy-first design. Files are encrypted on the client side, meaning users retain control over their data rather than relying solely on server-side security.

End-to-end encryption: Files are encrypted before they leave your device.
Simple folder-based storage: A familiar structure similar to local drives.
Large file support: Well suited for transferring big archives and media files.
Link-based sharing: Easy file sharing with optional encryption keys.
Cross-platform access: Available via web, desktop, and mobile apps.

What is Microsoft SharePoint?

Microsoft SharePoint is a document management and collaboration platform at the heart of Microsoft 365. Rather than acting as a simple file drive, SharePoint organizes content into sites and document libraries designed for structured, team-based collaboration.

Site-based organization: Files live inside team or project sites.
Microsoft 365 integration: Works seamlessly with Teams, OneDrive, and Office apps.
Granular permissions: Access can be controlled at site, library, or file level.
Version history: Changes are tracked automatically with rollback support.
Enterprise governance: Built-in compliance and retention features.

Comparison: MEGA vs Microsoft SharePoint

Before transferring files from MEGA to Microsoft SharePoint, it helps to understand how differently these platforms are designed. MEGA emphasizes privacy and straightforward storage, while SharePoint focuses on structured collaboration within a broader enterprise ecosystem.

Aspect	MEGA	Microsoft SharePoint
Primary Focus	Secure cloud storage and file sharing	Enterprise document collaboration
Storage Structure	Traditional folders	Sites and document libraries
Security Model	Client-side encryption	Server-side security with compliance controls
Integration	Standalone cloud storage	Tightly integrated with Microsoft 365
Typical Use Case	Personal or small-team file storage	Organization-wide content management

In practice, MEGA feels closer to a secure online hard drive, while SharePoint behaves more like a collaborative workspace. These differences often influence how and why users decide to move data between the two.

Things to Consider Before Transferring

Before starting a transfer from MEGA to SharePoint, review your existing folder structure. MEGA uses a simple folder hierarchy, while SharePoint relies on sites and document libraries, so some planning helps avoid confusion later.

Make sure you have the correct permissions on the SharePoint side. Upload rights depend on Microsoft 365 roles, and missing permissions can cause uploads to fail or land in the wrong location.

Finally, think about how the transfer should run. Small file sets can be handled manually, while larger datasets may benefit from automation or cloud-based tools that do not rely on local disk space or a constantly running browser session.

Method 1: Download and Upload Files Manually

Step 1: Download Files from MEGA

Begin by opening the MEGA web interface and signing in to your account. Navigate to the folders containing the files you want to move into SharePoint. You can select individual files or multiple items at once using Ctrl (Windows) or Command (macOS).

Once selected, use the download option to save the files to your computer. If you are downloading folders, MEGA will package them into an archive. After the download finishes, extract the files so they are ready for upload.

⬇️ Download files from MEGA to your local computer

Step 2: Upload Files to SharePoint

Open your SharePoint site in a web browser and navigate to the target document library. Use the Upload button or drag and drop files directly into the library window.

This is also a good opportunity to reorganize folders so they align better with SharePoint’s site-based structure.

⬆️ Upload files from your computer into a SharePoint document library

Manual transfers work best for small or occasional migrations. If you are dealing with a large number of files or want to avoid long upload sessions, command-line tools or cloud-based transfer services may be a better fit.

Method 2: Command-Line Transfer with Rclone

Step 1: Install Rclone and Configure MEGA & SharePoint Remotes

For users who are comfortable working in a terminal, rclone offers a flexible and highly controllable way to transfer files between cloud storage services. It supports both MEGA and Microsoft SharePoint, allowing you to copy or synchronize data directly without relying on a browser.

Start by downloading rclone from the official website and installing it on your system. Once installed, open your terminal (or Command Prompt on Windows) and run rclone config. This launches an interactive setup process where you define connections, known as remotes, for each cloud service.

MEGA remote: When prompted to choose a storage type, select mega. You will be asked to sign in with your MEGA account credentials. After authentication, rclone creates a remote (for example, mega:) that provides access to your MEGA folders.
SharePoint remote: Choose onedrive as the backend. During the setup process, rclone will ask which account type you want to use—select SharePoint. After signing in with your Microsoft 365 account, rclone lists available SharePoint sites and their document libraries, allowing you to bind the remote to the correct location.

Step 2: Start the Transfer

After both remotes are configured, you can begin transferring files from MEGA to SharePoint using standard rclone commands. A typical copy operation might look like this:

rclone copy mega:/Projects sharepoint:/SharedDocuments/Projects --progress

This command copies files from the Projects folder in MEGA into a corresponding document library path in SharePoint. If you want SharePoint to mirror the source exactly, a one-way sync command can be used instead:

rclone sync mega:/Archives sharepoint:/Archives --progress --exclude "*.tmp"

Before running large operations, adding --dry-run is strongly recommended. It allows you to see what would change without actually transferring or deleting any files.

This approach is best suited for advanced users who need automation, filtering rules, or scheduled transfers. Rclone supports bandwidth limits, detailed include and exclude patterns, and unattended execution through cron jobs or the Windows Task Scheduler. The main drawback is the initial setup, especially when selecting the correct SharePoint site and document library during configuration.

Method 3: Cloud-to-Cloud Transfer with CloudsLinker

Overview: Move Files from MEGA to SharePoint Online

CloudsLinker lets you transfer files directly from MEGA to Microsoft SharePoint without downloading anything to your computer. Once a task starts, it runs in the cloud and can keep going even if you close your browser or shut down your laptop.

Step 1: Add MEGA as the Source

Sign in to app.cloudslinker.com and open your dashboard. Click Add Cloud, then choose MEGA from the list of supported services.

To connect MEGA, enter the email and password you use for your MEGA account and complete the authorization flow. After the connection succeeds, MEGA will appear in your cloud list and can be selected as the source for transfers.

Add MEGA to CloudsLinker using email and password

Step 2: Add SharePoint as the Destination

Next, add Microsoft SharePoint as the destination. Sign in with your Microsoft 365 account and confirm the SharePoint site where you want the files to land.

If your SharePoint site contains multiple document libraries, CloudsLinker will prompt you to select the one you plan to use. That library becomes the default destination for the transfer.

Add Microsoft SharePoint in CloudsLinker

Step 3: Choose What to Transfer and Where It Goes

Open the Transfer section. On the source side, select MEGA and choose the folders or files you want to move. On the destination side, select your connected SharePoint library and pick the target folder.

This is where you decide how your MEGA content will be organized in SharePoint. If you want to adjust folder placement, do it here before starting the task.

Select MEGA as source and SharePoint as destination

Step 4: Start the Task and Monitor Progress

Start the transfer and track progress from the task list. CloudsLinker shows real-time status updates, processed file counts, and any items that need attention. You can pause and resume tasks whenever necessary.

When the job finishes, you’ll get a completion summary showing which files transferred successfully. Your data will then be available in SharePoint and ready to be shared with your team.

If you’re moving a large number of files or prefer a hands-off workflow, CloudsLinker is a practical option for transferring data from MEGA to SharePoint without consuming local storage or requiring a long-running browser upload session.

Need to Transfer Between Other Cloud Platforms?

Besides SharePoint, CloudsLinker supports transfers across many popular cloud services, including OneDrive, MEGA, Box, WebDAV, and more—without keeping your computer online during the migration.

Comparing Three Ways to Transfer Files from MEGA to SharePoint

When moving files from MEGA to Microsoft SharePoint, there is no universally “best” option. The right method depends on practical considerations such as how much data you are transferring, whether automation matters, and how much technical setup you are willing to handle. The table below compares three commonly used approaches.

Method	Ease of Use	Transfer Speed	Best Suited For	Uses Local Bandwidth	Technical Skill
Manual Download & Upload	★★★★★	★★★☆☆	Small folders or one-off transfers	Yes	Beginner
Rclone (Command Line)	★★★☆☆	★★★★☆	Automated or recurring transfers	Yes	Advanced
CloudsLinker (Cloud-to-Cloud)	★★★★★	★★★★★	Large datasets or unattended migrations	No	Beginner

For a small number of files, downloading data from MEGA and uploading it to SharePoint through a browser is often the quickest way to get started. Rclone becomes useful when you need more control, such as filtering files or scheduling transfers, but it requires comfort with the command line and local system resources.

When file counts grow or when you want the migration to run without tying up your computer, a cloud-based solution like CloudsLinker stands out by handling the transfer entirely online. This approach avoids local bandwidth limitations and allows the task to continue even after you close your browser.

Key Considerations Before Moving Files from MEGA to SharePoint

Transferring files from MEGA to Microsoft SharePoint is usually manageable, but a bit of preparation can prevent common issues—especially when encryption, large folders, or permission boundaries are involved.

Confirm Access to All MEGA Folders: Make sure you can access and download every folder you intend to move. Shared links or folders with limited permissions may not transfer as expected.
Plan the SharePoint Structure in Advance: SharePoint organizes files into sites and document libraries, which do not always map cleanly to MEGA’s folder-based layout. Deciding where content should live beforehand saves time later.
Think About How the Transfer Will Run: Manual uploads and rclone transfers rely on your local network and device. For unstable connections or long-running jobs, a cloud-based option such as CloudsLinker can run the migration entirely online.
Review File Size and Naming Constraints: SharePoint supports very large files, but long paths or unsupported characters can still cause issues. Large archives and deeply nested folders are worth reviewing before migration.
Verify SharePoint Permissions: Ensure your Microsoft 365 account has write access to the correct site and document library. Missing permissions are a common cause of failed uploads.
Consider Long-Term Needs: If this is more than a one-time transfer, features such as progress tracking, retries, and unattended execution become increasingly important.

Spending a few minutes on planning often saves hours later. Understanding how SharePoint organizes content—and choosing a transfer method that matches your data size and workflow—leads to a much smoother MEGA to SharePoint migration.

MEGA to SharePoint Migration FAQ

This is often related to access limitations or interrupted transfers. Files stored in shared folders or accessed via links may require full account-level access to transfer correctly.

Yes. CloudsLinker connects to each service through their official authorization mechanisms. Access can be revoked at any time, and transfers run without exposing your local device.

You can select the target document library during setup. This allows you to control exactly where MEGA files are placed within your SharePoint environment.

Yes. When using CloudsLinker, the transfer runs entirely in the cloud, so your computer does not need to remain powered on.

For large datasets, cloud-to-cloud transfers are usually the most efficient. They avoid local bandwidth limits and can run unattended, which is especially useful for multi-day migrations.

Conclusion

There is no single best way to transfer files from MEGA to SharePoint, as each method has its own strengths and limitations. Manual downloading and uploading works well for small, occasional transfers but becomes inefficient when file volumes increase. Rclone offers greater control and automation for technically experienced users, though it requires setup and command-line familiarity. For larger migrations or situations where local bandwidth and disk space are a concern, a cloud-to-cloud solution like CloudsLinker provides a more hands-off option by running the transfer entirely online. Ultimately, the right choice depends on how much data you need to move, your technical comfort level, and how much time you want to spend managing the process.

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